CDS

Accession Number TCMCG015C08969
gbkey CDS
Protein Id XP_027105890.1
Location join(15918236..15918600,15919823..15919940,15920016..15920190,15920594..15920783,15921035..15921152,15921220..15921394,15921665..15921836,15922867..15922981,15923055..15923229,15926143..15926198)
Gene LOC113726394
GeneID 113726394
Organism Coffea arabica

Protein

Length 552aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA506972
db_source XM_027250089.1
Definition DNA ligase 1-like isoform X2 [Coffea arabica]

EGGNOG-MAPPER Annotation

COG_category K
Description Upstream activation factor subunit
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03021        [VIEW IN KEGG]
KEGG_ko ko:K15223        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0000120        [VIEW IN EMBL-EBI]
GO:0000500        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005667        [VIEW IN EMBL-EBI]
GO:0005730        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0006356        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009891        [VIEW IN EMBL-EBI]
GO:0009893        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010557        [VIEW IN EMBL-EBI]
GO:0010604        [VIEW IN EMBL-EBI]
GO:0010628        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031325        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031328        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044452        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0044798        [VIEW IN EMBL-EBI]
GO:0045893        [VIEW IN EMBL-EBI]
GO:0045935        [VIEW IN EMBL-EBI]
GO:0045943        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051173        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051254        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:1902680        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:1903508        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGTTTCGGAGTCGGAGCTAGTAAATCGGCTCCGGGAAATCCTTCGAACCTCCGACCTAGACATTGCCACCGCTGGCTCCGTTCGCCGCCAACTCGAGGAGGAATTCGGGGTTAGTCTGCATGACAGGAAAACCTTCATAAGCGAGCAAATTGACTCGTTCCTCTCAGAACTTAGAAACGATGACGCCCAACAACAACATCGAGAAGAAACCCAGGAAGATAGCAGTGATGATGAGGAGGTAAGGGAAGTAAAGGTTGAGGATGTGAAGCAAGATGATGAGAATGAGGATAGTGGGTCCCACACCCAGGAAGTGGCGATTGGAAAAGATGAAGGAAGTGATGGAGTAAGAAGCAAGCCAAAAAGTAGGTCTCACAAGAAGGATAAAAATGAAAAAAAAAAGGGAAATGGCTTTGGCAAAACATGGGCATTATCTCCTCAACTTCAGGAAATTGTTGGAGTGCCAGAAATGGCTAGGACTGAGGTGGTAAAAAGGATGTGGGCATACATCAGGGAGAATAATTTGCAAAATCCAAAGGATAAGCGAAAGATAATATGTGATGAAAACTTGCGTGGAATTTTTCAAGTAAAGAGTATTAACATGTTTCAGATGAATAAAGCTCTGTCCAAGCACATGTGGCCCGTTGATTCAGAAGATGAACCCCAGAAGCACAACACACAACAGCATCAACAAGATCAAGAAGAAGCGGAAGAAGAAGATAGTAATGGTGAAGAGATGAAACAAGAATTTGAGAATCTGAAACAAGAACTGAATGAGGGTAGTGTTCACCAGGAAGTGGACGTTGAACATGAGGAAGAAAGTCATGGAGTGAGAAGCAAGAAGAGAAGTAGGTCTTACAAGATGGATAACAATGATAAGAAAAAGAGAAGCGGCTTTAACAAACCATGGGCAATTTCTCCTCAACTTCAGAAAATTGTTGGAGTGAACCAGATGGCTAGACCTGAGGTTGTCAAAAAGATGTGGGTGTACATTCGCGAGAAGAATTTGCAAAATCCGAAGGATAAGCGAAAGATAATATGTGATCAAACCTTGCATGGAATTTTTCAGGTCAAGAATATTAACATGTTTCAGATGAATAAAGCACTGTCAAAGCACATGTGGCCCATTGATGCAGAAGATGATCACCAAGAAGCTGAAGAAGACAGTAATGGTGAAGAGACAGAAGAACAATCAGAGGATGTGAAGCAAGAAGAGAATGAGTACAGTGGGTCCAACGAAGTGGACATAGGAGGAGAAGGAGAAGGAGAAGGAGAAGAAGAAGAAAGTGATGGAATAAGAAATAAGAAAAAAAGGTCTCAAAGGATGGATGCAATTCAAAATAAAAAAGGAAGTGGCTTTAGCAAACCATGTGCCATATCTCCCCAACTTCAGGAACTTGTTGGAGTGCCTGAGATGGCTAGAACCGAGGTTGTCAAAAAAGTGTGGGCTTACATCCGGGAGAAGAATTTGCAAAATCCAAAGGATAAGCGGAAAATTATATGTGATGAAGCCTTGCGTGCCATTTTTCGAGTCAATACTATCAACATGTTTCAAATGAATAAAGTACTCTCCAAGCACATATGGCCCATTGATATAGAATATGCAACTCCTATCAAATCTTCACAGAAGAAAAGGCAGCGGGAAAAGGACCGGCAATAA
Protein:  
MVSESELVNRLREILRTSDLDIATAGSVRRQLEEEFGVSLHDRKTFISEQIDSFLSELRNDDAQQQHREETQEDSSDDEEVREVKVEDVKQDDENEDSGSHTQEVAIGKDEGSDGVRSKPKSRSHKKDKNEKKKGNGFGKTWALSPQLQEIVGVPEMARTEVVKRMWAYIRENNLQNPKDKRKIICDENLRGIFQVKSINMFQMNKALSKHMWPVDSEDEPQKHNTQQHQQDQEEAEEEDSNGEEMKQEFENLKQELNEGSVHQEVDVEHEEESHGVRSKKRSRSYKMDNNDKKKRSGFNKPWAISPQLQKIVGVNQMARPEVVKKMWVYIREKNLQNPKDKRKIICDQTLHGIFQVKNINMFQMNKALSKHMWPIDAEDDHQEAEEDSNGEETEEQSEDVKQEENEYSGSNEVDIGGEGEGEGEEEESDGIRNKKKRSQRMDAIQNKKGSGFSKPCAISPQLQELVGVPEMARTEVVKKVWAYIREKNLQNPKDKRKIICDEALRAIFRVNTINMFQMNKVLSKHIWPIDIEYATPIKSSQKKRQREKDRQ